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Timothy Allen

Timothy Allen

Assistant Professor of Biomedical Engineering

B.S.E., Biomedical Engineering, Duke University, 1999
Ph.D., Bioengineering, University of California San Diego, 2006

Department of Biomedical Engineering
University of Virginia
Box 800759 Health System, Room 2322
Charlottesville, VA 22908

teallen@virginia.edu

Selected Publications

Teaching Interests

Selected Publications

Allen TE, Price ND, Joyce AR, Palsson BO. Long-range periodic patterns in microbial genomes indicate significant multi-scale chromosomal organization. PLoS Comput Biol. 2006 Jan;2(1):e2.

Herring CD, Raffaelle M, Allen TE, Kanin EI, Landick R, Ansari AZ, Palsson BO. Immobilization of Escherichia coli RNA polymerase and location of binding sites by use of chromatin immunoprecipitation and microarrays. J Bacteriol. 2005 Sep;187(17):6166-74.

Allen TE, Herrgard MJ, Liu M, Qiu Y, Glasner JD, Blattner FR, Palsson BO. Genome-scale analysis of the uses of the Escherichia coli genome: model-driven analysis of heterogeneous data sets. J Bacteriol. 2003 Nov;185(21):6392-9.

Allen TE, Palsson BO. Sequence-based analysis of metabolic demands for protein synthesis in prokaryotes. Theor Biol. 2003 Jan 7;220(1):1-18.

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